Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941456.1_cds_XP_016485282.1_76225
CDS Infomation

[gene=LOC107805728] [db_xref=GeneID:107805728] [protein=V-type proton ATPase subunit B2-like] [protein_id=XP_016485282.1] [location=complement(join(18388..18573,18656..18739,18866..18919,19024..19071,19628..19710,19814..19964,20135..20272,20384..20512,20851..21059,21153..21264,21838..21897,22026..22124,22244..22299,22800..22857))] [gbkey=CDS]
Sequence

ATGGGAGTTGCACCTAACAATATTGAGATGGAGGAGGGAAACCTGGAGGTTGGAATGGAA
TACAGAACTGTCTCCGGTGTTGCTGGACCGCTGGTTATCCTTGACAAAGTTAAGGGACCC
AAGTACCAGGAGATTGTTAACATTCGGTTGGGAGATGGAACTACTCGACGTGGACAAGTT
CTGGAAGTTGATGGTGAAAAAGCTGTTGTTCAGGTTTTTGAAGGAACATCTGGAATTGAC
AACAAATACACAACTGTGCAGTTTACTGGGGAGGTTTTAAAGACACCAGTTTCATTGGAT
ATGCTTGGACGCATCTTTAATGGTTCTGGCAAGCCAATTGACAACGGTCCTCCTATTTTA
CCTGAGGCTTACAGGGATATCTCAGGAAGTTCTATCAACCCTAGTGAGAGAACATATCCT
GAAGAGATGATACAGACAGGAATTTCCACAGTAGATGTCATGAATTCAATTGCTAGAGGG
CAGAAGATTCCTCTTTTCTCTGCCGCCGGTCTTCCTCATAATGAGATTGCAGCCCAGATC
TGTCGTCAGGCTGGACTGGTGAAGAGGTTGGAGAAAGCTGACAACCTTCTTGAGGGTGGT
GAAGGGGACAATTTTGCCATAGTCTTTGCTGCTATGGGAGTCAACATGGAAACAGCACAA
TTTTTTAAACGTGATTTTGAGGAAAATGGATCTATGGAGAGAGTGACACTCTTCTTAAAC
TTGGCTAATGATCCTACTATAGAGCGTATTATTACTCCCAGGATTGCTCTGACAACTGCA
GAATACCTAGCATATGAGTGTGGAAAGCATGTTCTTGTAATTTTAACTGATATGAGTTCA
TATGCTGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCTGGAAGGCGTGGA
TATCCTGGTTATATGTATACCGATCTGGCAACAATCTATGAACGAGCTGGACGTATCGAG
GGACGAACGGGCTCCATCACACAAATTCCAATTCTGACCATGCCAAATGATGATATTACA
CATCCAACCCCGGATCTTACAGGTTATATCACCGAAGGACAAATATATATTGACCGACAG
CTTCATAACCGGCAGATATACCCACCAATCAATGTGCTTCCATCCCTGTCTCGGTTGATG
AAGAGTGCCATTGGTGAGGGTATGACTAGGAGGGATCATTCTGATGTATCCAACCAGCTG
TATGCAAATTATGCTATTGGCAAGGATGTCCAGGCAATGAAAGCTGTGGTTGGAGAAGAA
GCATTATCTTCTGAGGACCTGCTTTACTTAGAGTTTCTTGACAAATTCGAGAGGAAGTTT
GTTGCCCAAGGAGCCTACGACACCCGTAACATTTTCCAGTCGCTTGATTTAGCTTGGACA
CTCCTTCGGATCTTCCCTCGTGAGCTTCTTCACCGTATTCCCGCGAAGACCCTGGATCAG
TACTACAGCCGCGATGCGTCTAATTGA

Peptide Sequence

PEP ID

XP_016485282.1
PEP Infomation

PREDICTED: V-type proton ATPase subunit B2-like [Nicotiana tabacum]
Sequence

MGVAPNNIEMEEGNLEVGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQV
LEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPIL
PEAYRDISGSSINPSERTYPEEMIQTGISTVDVMNSIARGQKIPLFSAAGLPHNEIAAQI
CRQAGLVKRLEKADNLLEGGEGDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLN
LANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRG
YPGYMYTDLATIYERAGRIEGRTGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQ
LHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEE
ALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQ
YYSRDASN

Transcript Sequence

Gene sequence data has not been registered.